STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysK_3Cysteine synthase. (346 aa)    
Predicted Functional Partners:
cysE
Serine acetyltransferase.
  
 0.962
metC
Cystathionine beta-lyase.
 
 0.860
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.836
sir
Sulfite reductase [ferredoxin].
  
 
 0.772
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.742
sat/cysC
Putative bifunctional SAT/APS kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.722
tyrB
Aromatic-amino-acid aminotransferase.
   
 0.687
mdeA
Methionine gamma-lyase.
  
 
 0.687
patB
Cystathionine beta-lyase PatB.
    
 0.684
yitJ
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase.
    
 0.680
Your Current Organism:
Ruegeria atlantica
NCBI taxonomy Id: 81569
Other names: ATCC 700000, Agrobacterium atlanticum, Agrobacterium meteori, CECT 4292, CIP 105975, DSM 5823, IAM 14463, IFO 15792, JCM 21234, NBRC 15792, R. atlantica
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