Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BXP5Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
A0A484CFM5
Uncharacterized protein.
 
     0.930
A0A484CFX1
Uncharacterized protein.
 
      0.899
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
 0.632
A0A484D532
Peptidase S72 domain-containing protein.
    
 0.617
A0A484DE52
Peptidase S72 domain-containing protein.
    
 0.617
A0A484CSR3
LIM zinc-binding domain-containing protein.
   
 0.581
A0A484C521
Guanylate kinase-like domain-containing protein.
   
  0.579
A0A484CVU3
Uncharacterized protein.
    
 0.563
A0A484CRS2
Uncharacterized protein.
    
 0.532
A0A484CYR8
Uncharacterized protein.
    
 0.527
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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