STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BY02Integrase catalytic domain-containing protein. (258 aa)    
Predicted Functional Partners:
A0A484C5E1
Helicase C-terminal domain-containing protein.
    
 0.972
A0A484CB36
Helicase ATP-binding domain-containing protein.
    
 0.972
A0A484CPW6
Uncharacterized protein.
   
 0.828
A0A484D8C1
Uncharacterized protein.
   
 0.828
A0A484DFD4
Uncharacterized protein.
   
 
 0.827
A0A484CDH9
Uncharacterized protein.
     
 0.813
A0A484CZM5
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.711
A0A484CWW9
Med12 domain-containing protein.
   
 0.691
A0A484C847
Uncharacterized protein.
   
 0.683
A0A484CG17
SET domain-containing protein.
   
 0.679
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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