STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BY20Uncharacterized protein. (690 aa)    
Predicted Functional Partners:
A0A484C8X6
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 0.999
A0A484C9U5
Pep3_Vps18 domain-containing protein.
   
 0.999
A0A484CDQ0
CNH domain-containing protein.
   
 0.999
A0A484CRF8
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 0.999
A0A484DFH1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.999
A0A484DPI7
CNH domain-containing protein.
   
 0.999
A0A484CAF0
Uncharacterized protein.
    
 
 0.995
A0A484DPS0
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.990
A0A484C2L8
Uncharacterized protein.
    
 
 0.979
A0A484DAL7
V-SNARE coiled-coil homology domain-containing protein.
    
 
 0.978
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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