Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BY61POU domain protein. (455 aa)    
Predicted Functional Partners:
A0A484CVB5
HMG box domain-containing protein.
  
 0.659
A0A484CSU1
Uncharacterized protein.
   
 0.633
A0A484DKK3
Uncharacterized protein.
    
 
 0.621
A0A484CXI9
HMG box domain-containing protein.
   
 0.619
A0A484D208
HMG box domain-containing protein.
   
 0.619
A0A484CLA1
Homeobox domain-containing protein.
    
 0.610
A0A484C6E8
Uncharacterized protein.
    
  0.607
A0A484DNK7
MFS domain-containing protein.
    
 
 0.607
A0A484C4M4
PAS domain-containing protein.
    
 0.601
A0A484DJK2
Uncharacterized protein.
    
 0.601
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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