STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BY86Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
A0A484CE34
Uncharacterized protein.
    
 
 0.921
A0A484DQT6
E3 ubiquitin-protein ligase.
    
 
 0.921
A0A484CLC7
Uncharacterized protein.
    
   0.806
A0A484C605
Uncharacterized protein.
    
 
 0.748
A0A484D1G6
E3 ubiquitin-protein ligase.
    
 
 0.748
A0A484CTP9
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
   0.721
A0A484DNF3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
   0.721
A0A484D6X0
E3 ubiquitin-protein ligase.
    
 
 0.719
A0A484DDH3
E3 ubiquitin-protein ligase.
    
 
 0.719
A0A484D4K0
Uncharacterized protein.
   
 
 0.713
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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