STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BY95Uncharacterized protein. (1325 aa)    
Predicted Functional Partners:
A0A484C3L1
Uncharacterized protein.
     
0.927
A0A484CVJ9
Uncharacterized protein.
  
  
 
0.901
A0A484DAK2
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.643
A0A484DRL3
Ubiquitin carboxyl-terminal hydrolase.
    
  0.639
A0A484CGF8
PDZ domain-containing protein.
    
 0.600
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.564
A0A484CUC4
Uncharacterized protein.
    
  0.553
A0A484CVE0
Uncharacterized protein.
    
  0.553
A0A484CBK8
Uncharacterized protein.
      
 0.524
A0A484BZ31
Uncharacterized protein.
   
 0.517
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (26%) [HD]