A0A484BYA9 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484BYA9

2Fe-2S ferredoxin-type domain-containing protein. (167 aa)

Predicted Functional Partners:

A0A484C2Y6

0.972

A0A484C291

0.963

A0A484DJX1

0.961

A0A484DIJ4

0.950

A0A484CEV5

0.947

A0A484C7W4

0.937

A0A484CDG7

0.931

A0A484CYH8

0.930

A0A484CDV5

0.926

A0A484DCH0

0.926

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYA9	A0A484C291	2Fe-2S ferredoxin-type domain-containing protein.	FA_desaturase domain-containing protein.	0.963
A0A484BYA9	A0A484C2Y6	2Fe-2S ferredoxin-type domain-containing protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.972
A0A484BYA9	A0A484C7W4	2Fe-2S ferredoxin-type domain-containing protein.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.937
A0A484BYA9	A0A484CDG7	2Fe-2S ferredoxin-type domain-containing protein.	Rieske domain-containing protein.	0.931
A0A484BYA9	A0A484CDV5	2Fe-2S ferredoxin-type domain-containing protein.	NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.926
A0A484BYA9	A0A484CEV5	2Fe-2S ferredoxin-type domain-containing protein.	SCP2 domain-containing protein.	0.947
A0A484BYA9	A0A484CYH8	2Fe-2S ferredoxin-type domain-containing protein.	Aminotran_5 domain-containing protein.	0.930
A0A484BYA9	A0A484DCH0	2Fe-2S ferredoxin-type domain-containing protein.	NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.926
A0A484BYA9	A0A484DIJ4	2Fe-2S ferredoxin-type domain-containing protein.	Aminotran_5 domain-containing protein.	0.950
A0A484BYA9	A0A484DJX1	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.961
A0A484C291	A0A484BYA9	FA_desaturase domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.963
A0A484C291	A0A484C7W4	FA_desaturase domain-containing protein.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.760
A0A484C291	A0A484CDG7	FA_desaturase domain-containing protein.	Rieske domain-containing protein.	0.834
A0A484C291	A0A484CEV5	FA_desaturase domain-containing protein.	SCP2 domain-containing protein.	0.534
A0A484C291	A0A484DIJ4	FA_desaturase domain-containing protein.	Aminotran_5 domain-containing protein.	0.551
A0A484C291	A0A484DJX1	FA_desaturase domain-containing protein.	Uncharacterized protein.	0.406
A0A484C2Y6	A0A484BYA9	NADPH:adrenodoxin oxidoreductase, mitochondrial.	2Fe-2S ferredoxin-type domain-containing protein.	0.972
A0A484C2Y6	A0A484C7W4	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.760
A0A484C2Y6	A0A484CDG7	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Rieske domain-containing protein.	0.834
A0A484C2Y6	A0A484CEV5	NADPH:adrenodoxin oxidoreductase, mitochondrial.	SCP2 domain-containing protein.	0.534