Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYB5WD_REPEATS_REGION domain-containing protein. (409 aa)    
Predicted Functional Partners:
A0A484D9P9
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.998
A0A484BZB5
Autophagy-related protein 3.
   
 0.997
A0A484D860
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.997
A0A484CTW5
ATG11 domain-containing protein.
   
 0.993
A0A484CGI4
Uncharacterized protein.
   
 0.992
A0A484C8U9
Uncharacterized protein.
   
 0.991
A0A484CNR8
Uncharacterized protein.
   
 0.991
A0A484CXV3
Uncharacterized protein.
    
 0.990
A0A484CUU5
Uncharacterized protein.
    
 0.972
A0A484DPZ7
Uncharacterized protein.
    
 0.949
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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