STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYE5Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (429 aa)    
Predicted Functional Partners:
A0A484CFU7
WD_REPEATS_REGION domain-containing protein.
    
 0.995
A0A484DDU8
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
  
 0.995
A0A484CY07
Uncharacterized protein.
  
 
 0.994
A0A484DLU3
Uncharacterized protein.
 0.994
A0A484BXQ3
Uncharacterized protein.
  
 0.993
A0A484C1D0
ACB domain-containing protein.
  
 0.993
A0A484CIC7
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.992
A0A484DKJ5
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.989
A0A484CSM3
Uncharacterized protein.
  
 0.988
A0A484CVY3
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.978
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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