STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYI7Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
A0A484CMM8
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.983
A0A484D8S2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.983
A0A484CMC5
Uncharacterized protein.
   
 0.846
A0A484DGP3
Uncharacterized protein.
   
 0.846
A0A484CEN5
Uncharacterized protein.
   
 0.841
A0A484C2B7
RRM domain-containing protein.
   
 0.840
A0A484CN84
RRM domain-containing protein.
   
 0.840
A0A484DF79
RRM domain-containing protein.
   
 0.811
A0A484DH46
RRM domain-containing protein.
   
 0.811
A0A484C669
Uncharacterized protein.
   
 0.798
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.