Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYL5FCP1 homology domain-containing protein. (262 aa)    
Predicted Functional Partners:
A0A484D819
Uncharacterized protein.
    
   0.725
A0A484D9D8
Uncharacterized protein.
    
   0.725
A0A484CLA2
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.710
A0A484CUI2
Uncharacterized protein.
    
 
 0.702
A0A484CXB2
S1 domain-containing protein.
    
 0.680
A0A484DJ77
RPOL4c domain-containing protein.
    
 0.677
A0A484DDT2
RNA_pol_L_2 domain-containing protein.
    
 0.663
A0A484CWF1
Uncharacterized protein.
    
 
 0.659
A0A484D0Q1
Uncharacterized protein.
   
  0.658
A0A484C739
LNS2 domain-containing protein.
    
 0.655
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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