A0A484BYL8 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484BYL8

Uncharacterized protein. (149 aa)

Predicted Functional Partners:

A0A484DPG7

0.997

A0A484CW34

0.995

A0A484BY84

0.990

A0A484D6N0

0.990

A0A484BZM5

0.965

A0A484CKH4

0.960

A0A484C2A5

0.944

A0A484CM46

0.944

A0A484C663

0.939

A0A484D676

0.923

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BY84	A0A484BYL8	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.990
A0A484BY84	A0A484BZM5	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	CALCITONIN domain-containing protein.	0.829
A0A484BY84	A0A484C2A5	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.983
A0A484BY84	A0A484C663	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.988
A0A484BY84	A0A484CM46	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.983
A0A484BY84	A0A484CW34	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.901
A0A484BY84	A0A484D676	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.932
A0A484BY84	A0A484D6N0	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.903
A0A484BY84	A0A484DPG7	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	CALCITONIN domain-containing protein.	0.993
A0A484BYL8	A0A484BY84	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.990
A0A484BYL8	A0A484BZM5	Uncharacterized protein.	CALCITONIN domain-containing protein.	0.965
A0A484BYL8	A0A484C2A5	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A484BYL8	A0A484C663	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A484BYL8	A0A484CKH4	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.960
A0A484BYL8	A0A484CM46	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A484BYL8	A0A484CW34	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.995
A0A484BYL8	A0A484D676	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A484BYL8	A0A484D6N0	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.990
A0A484BYL8	A0A484DPG7	Uncharacterized protein.	CALCITONIN domain-containing protein.	0.997
A0A484BZM5	A0A484BY84	CALCITONIN domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.829