STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYN6Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
A0A484DAW9
Nop domain-containing protein.
    
 0.967
A0A484DCS5
Uncharacterized protein.
    
 
 0.949
A0A484CSN9
U1-type domain-containing protein.
   
 0.938
A0A484DPT9
MFAP1 domain-containing protein.
   
 0.938
A0A484D153
PRP38_assoc domain-containing protein.
   
 0.935
A0A484DDZ7
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.933
A0A484DLZ1
Sm domain-containing protein.
    
 0.921
A0A484DMB4
Uncharacterized protein.
    
 0.920
A0A484D635
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.919
A0A484CWN4
Uncharacterized protein.
    
 0.916
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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