Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYP0DDE Tnp4 domain-containing protein. (346 aa)    
Predicted Functional Partners:
A0A484CD85
Myb_DNA-bind_5 domain-containing protein.
    
 
 0.945
A0A484DB76
Integrase catalytic domain-containing protein.
      
 0.704
A0A484CCK5
DDE_Tnp_1_7 domain-containing protein.
      
 0.689
A0A484CTE7
FGGY_N domain-containing protein.
      
 0.679
A0A484CV47
Uncharacterized protein.
      
 0.630
A0A484BZ76
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.621
A0A484CLN9
Uncharacterized protein.
   
    0.616
A0A484CD09
Uncharacterized protein.
   
 0.611
A0A484CBS0
Uncharacterized protein.
      
 0.498
A0A484C9I6
Uncharacterized protein.
    
 
 0.497
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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