Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYP3Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
A0A484CUY7
Uncharacterized protein.
    
 0.809
A0A484DMN5
FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.712
A0A484DDC6
Uncharacterized protein.
    
  0.632
A0A484D9A8
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
  
 0.631
A0A484DB90
Uncharacterized protein.
      
 0.630
A0A484CNB1
Uncharacterized protein.
      
 0.627
A0A484C8X9
Bms1-type G domain-containing protein.
      
 0.618
A0A484CUN9
Uncharacterized protein.
     
  0.603
A0A484D6G3
Uncharacterized protein.
     
  0.603
A0A484C0I6
DNA polymerase.
      
 0.583
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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