STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYQ8Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
A0A484DKC5
Uncharacterized protein.
    
 0.993
A0A484DJY0
Uncharacterized protein.
    
 0.986
A0A484D780
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.980
A0A484CNA6
WD_REPEATS_REGION domain-containing protein.
    
 0.970
A0A484DCI5
Tudor domain-containing protein.
    
 0.963
A0A484DJ09
Uncharacterized protein.
    
 0.958
A0A484C4I1
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.915
A0A484D1H6
SMN domain-containing protein.
    
 0.907
A0A484C6F2
Sm domain-containing protein.
    
 0.862
A0A484C011
WD_REPEATS_REGION domain-containing protein.
    
 
 0.847
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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