STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYW0RanBD1 domain-containing protein. (520 aa)    
Predicted Functional Partners:
A0A484CFI3
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
A0A484CN58
Peptidase S59 domain-containing protein.
   
 0.994
A0A484CS52
RRM Nup35-type domain-containing protein.
   
 0.994
A0A484CS89
Uncharacterized protein.
    
 0.994
A0A484D1N6
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 
 0.993
A0A484CE35
Uncharacterized protein.
   
 
 0.992
A0A484D4W1
Uncharacterized protein.
   
 
 0.992
A0A484CVU3
Uncharacterized protein.
   
 0.991
A0A484DGE3
Uncharacterized protein.
   
 0.991
A0A484CQT4
Uncharacterized protein.
   
 
 0.985
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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