Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYW4Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
A0A484CJ84
CS domain-containing protein.
    
   0.821
A0A484CAK0
Uncharacterized protein.
    
   0.779
A0A484D592
Uncharacterized protein.
      
 0.670
A0A484C8Y6
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.667
A0A484C0F4
Uncharacterized protein.
      
 0.612
A0A484C6D9
Uncharacterized protein.
      
 0.612
A0A484C6D6
RNase_Zc3h12a domain-containing protein.
    
 
 0.601
A0A484CUN5
Poly [ADP-ribose] polymerase.
    
 
 0.577
A0A484CW38
Poly [ADP-ribose] polymerase.
   
 
 0.572
A0A484CMX6
Uncharacterized protein.
   
 
 0.546
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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