Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYZ0Rho-GAP domain-containing protein. (757 aa)    
Predicted Functional Partners:
A0A484C3H1
Rhomboid domain-containing protein; Belongs to the peptidase S54 family.
      
 0.769
A0A484CI40
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.728
A0A484D0T9
Uncharacterized protein.
   
   0.716
A0A484D105
Uncharacterized protein.
   
   0.716
A0A484DB08
Protein kinase domain-containing protein.
   
    0.713
A0A484DDX1
DUF5595 domain-containing protein.
   
    0.695
A0A484DG86
Peptidase C50 domain-containing protein.
   
  
 0.681
A0A484C8R3
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.675
A0A484C0W5
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.649
A0A484BYE9
Uncharacterized protein.
      
 0.637
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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