STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BYZ1IF rod domain-containing protein; Belongs to the intermediate filament family. (471 aa)    
Predicted Functional Partners:
A0A484CCV3
Uncharacterized protein.
   
 0.748
A0A484CRJ5
Uncharacterized protein.
   
 0.748
A0A484D6V1
LEM domain-containing protein.
    
 0.746
A0A484CF75
CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.
    
 0.711
A0A484D800
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
0.700
A0A484CUW9
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.617
A0A484CV97
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.617
A0A484CC53
Ig-like domain-containing protein.
    
   0.612
A0A484CTF9
Ig-like domain-containing protein.
    
   0.612
A0A484C9I4
SUN domain-containing protein.
    
 0.594
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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