Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZ02Rab-GAP TBC domain-containing protein. (897 aa)    
Predicted Functional Partners:
A0A484BZP0
Uncharacterized protein.
    
 0.867
A0A484D3H7
Uncharacterized protein.
    
 0.867
A0A484CFY3
Uncharacterized protein.
    
 0.591
A0A484CIN8
Uncharacterized protein.
    
 0.591
A0A484CUU5
Uncharacterized protein.
    
 0.591
A0A484CXV3
Uncharacterized protein.
    
 0.591
A0A484CYY3
Uncharacterized protein.
    
 0.591
A0A484DA30
Uncharacterized protein.
    
 0.591
A0A484DJE0
Uncharacterized protein.
    
 0.591
A0A484DMG4
Uncharacterized protein.
    
 0.591
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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