STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZ02Rab-GAP TBC domain-containing protein. (897 aa)    
Predicted Functional Partners:
A0A484BZP0
Uncharacterized protein.
    
 0.694
A0A484D3H7
Uncharacterized protein.
    
 0.694
A0A484CND1
VPS9 domain-containing protein.
   
  0.685
A0A484DBX0
Uncharacterized protein.
   
  0.685
A0A484DIA8
Uncharacterized protein.
   
  0.685
A0A484C237
Uncharacterized protein.
    
 0.633
A0A484CSA8
Uncharacterized protein.
    
 0.633
A0A484CWK0
Uncharacterized protein.
    
 0.633
A0A484D7U5
Uncharacterized protein.
    
 0.633
A0A484CGS1
Uncharacterized protein.
    
  0.570
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.