STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZ44ATP synthase subunit gamma. (293 aa)    
Predicted Functional Partners:
A0A484BYZ7
Uncharacterized protein.
   
 0.999
A0A484C2D2
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
A0A484CEE8
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
A0A484CXH2
Uncharacterized protein.
  
 0.999
A0A484CZB0
ATP-synt_DE_N domain-containing protein.
  
 0.999
A0A484D5K3
Uncharacterized protein.
   
 0.999
A0A484D633
Uncharacterized protein.
   
 0.999
A0A484DCK6
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
A0A484DLN8
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
A0A484CJF0
Nbl1_Borealin_N domain-containing protein.
  
 0.998
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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