Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZ45Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
A0A484C2E5
T-box_assoc domain-containing protein.
    
 0.950
A0A484D1K2
Uncharacterized protein.
    
 0.897
A0A484DQI8
ETS domain-containing protein.
    
 0.882
A0A484BYU6
Runt-related transcription factor.
    
 0.877
A0A484CPE1
BHLH domain-containing protein.
   
 0.860
A0A484D180
BHLH domain-containing protein.
   
 0.860
A0A484D803
Uncharacterized protein.
    
 
 0.856
A0A484D481
Uncharacterized protein.
    
 0.807
A0A484CA45
Fork-head domain-containing protein.
    
 0.792
A0A484CAD4
Fork-head domain-containing protein.
    
 0.792
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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