A0A484BZ91 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BZ91	A0A484C4T4	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.468
A0A484BZ91	A0A484C6N4	Uncharacterized protein.	ThiF domain-containing protein.	0.465
A0A484BZ91	A0A484CC75	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.468
A0A484BZ91	A0A484CCQ2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.543
A0A484BZ91	A0A484CH11	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A484BZ91	A0A484CL86	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.468
A0A484BZ91	A0A484CR26	Uncharacterized protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.495
A0A484BZ91	A0A484DGE7	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A484BZ91	A0A484DHQ5	Uncharacterized protein.	Uncharacterized protein.	0.637
A0A484BZ91	A0A484DI67	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.468
A0A484C4T4	A0A484BZ91	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.468
A0A484C4T4	A0A484CCQ2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Ubiquitin-like domain-containing protein.	0.447
A0A484C4T4	A0A484CR26	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.592
A0A484C4T4	A0A484DGE7	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.509
A0A484C6N4	A0A484BZ91	ThiF domain-containing protein.	Uncharacterized protein.	0.465
A0A484C6N4	A0A484CCQ2	ThiF domain-containing protein.	Ubiquitin-like domain-containing protein.	0.757
A0A484C6N4	A0A484DGE7	ThiF domain-containing protein.	Uncharacterized protein.	0.790
A0A484C6N4	A0A484DHQ5	ThiF domain-containing protein.	Uncharacterized protein.	0.700
A0A484CC75	A0A484BZ91	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.468
A0A484CC75	A0A484CCQ2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Ubiquitin-like domain-containing protein.	0.447