STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZC8Uncharacterized protein; Belongs to the DEAD box helicase family. (706 aa)    
Predicted Functional Partners:
A0A484BYX5
Uncharacterized protein.
   
 0.901
A0A484CHB3
Tr-type G domain-containing protein.
  
 0.898
A0A484CHY6
Uncharacterized protein.
    
 0.847
A0A484CSF4
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 
0.844
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.813
A0A484CXH2
Uncharacterized protein.
  
 
 0.812
A0A484C2D2
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.810
A0A484D582
Uncharacterized protein.
    
 0.809
A0A484D5H4
Uncharacterized protein.
    
 0.809
A0A484CCZ3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.801
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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