Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZI4ANK_REP_REGION domain-containing protein. (438 aa)    
Predicted Functional Partners:
A0A484CHN3
Uncharacterized protein.
   
 
 0.782
A0A484C828
ANK_REP_REGION domain-containing protein.
   
 
 0.729
A0A484CNJ4
IRF tryptophan pentad repeat domain-containing protein.
   
 
 0.654
A0A484CGW7
Uncharacterized protein.
    
 
 0.645
A0A484C7V8
SEFIR domain-containing protein.
    
 0.639
A0A484CYK3
SEFIR domain-containing protein.
    
 0.639
A0A484D2F0
Protein kinase domain-containing protein.
    
 0.611
A0A484CI34
BZIP domain-containing protein.
   
 0.596
A0A484D5F5
BZIP domain-containing protein.
   
 0.571
A0A484CJE9
C3H1-type domain-containing protein.
   
 
 0.560
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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