STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZJ2Uncharacterized protein; Belongs to the peptidase C19 family. (1037 aa)    
Predicted Functional Partners:
A0A484CME9
Uncharacterized protein.
    
 0.864
A0A484DE46
Uncharacterized protein.
    
 
 0.837
A0A484DN91
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.787
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
  0.786
A0A484DRL3
Ubiquitin carboxyl-terminal hydrolase.
    
0.711
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
 0.709
A0A484CQL8
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.694
A0A484CX30
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.694
A0A484DC07
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.694
A0A484CFZ8
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.689
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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