Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZP7Casc1_N domain-containing protein. (721 aa)    
Predicted Functional Partners:
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
   
   0.941
A0A484CBI1
Uncharacterized protein.
   
 
 0.912
A0A484CDW2
WD_REPEATS_REGION domain-containing protein.
    
 
 0.908
A0A484C949
NYD-SP28 domain-containing protein.
   
 
 0.906
A0A484C9N0
Uncharacterized protein.
   
 
 0.896
A0A484D0G5
Uncharacterized protein.
   
 
 0.884
A0A484D1K7
DUF4201 domain-containing protein.
    
   0.884
A0A484D5L3
MYND-type domain-containing protein.
    
   0.884
A0A484D7F8
Uncharacterized protein.
    
   0.884
A0A484C614
Enkurin domain-containing protein.
    
   0.882
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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