Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484BZX6Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
A0A484DKW2
Uncharacterized protein.
  
 
 0.980
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.958
A0A484C4E2
PYNP_C domain-containing protein.
  
 0.951
A0A484CIY2
Uncharacterized protein.
 
 0.951
A0A484DMZ0
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.949
A0A484D521
TRANSKETOLASE_1 domain-containing protein.
  
 0.943
A0A484D6A8
TRANSKETOLASE_1 domain-containing protein.
  
 0.943
A0A484DHT5
TRANSKETOLASE_1 domain-containing protein.
  
 0.943
A0A484D9X6
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.935
A0A484C8Q3
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.907
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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