A0A484BZX6 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484BZX6

Uncharacterized protein. (318 aa)

Predicted Functional Partners:

A0A484C4E2

0.976

A0A484DMZ0

0.935

A0A484CK23

0.934

A0A484D3N7

0.934

A0A484D8A8

0.934

A0A484C821

0.932

A0A484DG63

0.932

A0A484DHT5

0.927

A0A484CIY2

0.924

A0A484D521

0.913

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BZX6	A0A484C4E2	Uncharacterized protein.	PYNP_C domain-containing protein.	0.976
A0A484BZX6	A0A484C821	Uncharacterized protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.932
A0A484BZX6	A0A484CIY2	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A484BZX6	A0A484CK23	Uncharacterized protein.	Triosephosphate isomerase.	0.934
A0A484BZX6	A0A484D3N7	Uncharacterized protein.	Mannose-6-phosphate isomerase.	0.934
A0A484BZX6	A0A484D521	Uncharacterized protein.	TRANSKETOLASE_1 domain-containing protein.	0.913
A0A484BZX6	A0A484D8A8	Uncharacterized protein.	Triosephosphate isomerase.	0.934
A0A484BZX6	A0A484DG63	Uncharacterized protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.932
A0A484BZX6	A0A484DHT5	Uncharacterized protein.	TRANSKETOLASE_1 domain-containing protein.	0.927
A0A484BZX6	A0A484DMZ0	Uncharacterized protein.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.935
A0A484C4E2	A0A484BZX6	PYNP_C domain-containing protein.	Uncharacterized protein.	0.976
A0A484C4E2	A0A484C821	PYNP_C domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.959
A0A484C4E2	A0A484CK23	PYNP_C domain-containing protein.	Triosephosphate isomerase.	0.467
A0A484C4E2	A0A484D8A8	PYNP_C domain-containing protein.	Triosephosphate isomerase.	0.467
A0A484C4E2	A0A484DG63	PYNP_C domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.959
A0A484C821	A0A484BZX6	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Uncharacterized protein.	0.932
A0A484C821	A0A484C4E2	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	PYNP_C domain-containing protein.	0.959
A0A484C821	A0A484D521	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	TRANSKETOLASE_1 domain-containing protein.	0.682
A0A484C821	A0A484DHT5	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	TRANSKETOLASE_1 domain-containing protein.	0.682
A0A484CIY2	A0A484BZX6	Uncharacterized protein.	Uncharacterized protein.	0.924