Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C010GFO_IDH_MocA domain-containing protein. (353 aa)    
Predicted Functional Partners:
A0A484CAM1
Rap-GAP domain-containing protein.
    
   0.764
A0A484C3D4
SGL domain-containing protein.
  
 
 0.746
A0A484CTN8
Nicotinamide-nucleotide adenylyltransferase.
  
 
 0.743
A0A484D5J3
Nicotinamide-nucleotide adenylyltransferase.
  
 
 0.743
A0A484D6L6
Rap-GAP domain-containing protein.
    
   0.738
A0A484DDU3
Rap-GAP domain-containing protein.
    
   0.738
A0A484DEY6
Uncharacterized protein.
    
   0.738
A0A484DPT2
Lysine--tRNA ligase.
  
    0.726
A0A484CHG1
Uncharacterized protein.
    
   0.719
A0A484CR91
Uncharacterized protein.
    
   0.719
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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