Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C021Uncharacterized protein. (1433 aa)    
Predicted Functional Partners:
A0A484CLY0
Brix domain-containing protein.
    
   0.926
A0A484D7R8
G-patch domain-containing protein.
    
   0.891
A0A484C6D6
RNase_Zc3h12a domain-containing protein.
    
 
 0.887
A0A484D1P7
RNase_Zc3h12a domain-containing protein.
    
 
 0.887
A0A484DPX4
Uncharacterized protein.
    
   0.869
A0A484C4A0
Uncharacterized protein.
    
   0.858
A0A484CXZ8
KOW domain-containing protein.
    
   0.852
A0A484CKH1
Ribosomal_L7Ae domain-containing protein.
    
   0.848
A0A484CL10
PUM-HD domain-containing protein.
    
   0.846
A0A484BZE2
Uncharacterized protein.
    
   0.845
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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