Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C072Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
A0A484C2N7
BZIP domain-containing protein.
      
 0.850
A0A484CGX8
Uncharacterized protein.
      
 0.769
A0A484C4X6
Uncharacterized protein.
    
 0.754
A0A484D189
Uncharacterized protein.
    
 0.754
A0A484CC61
Uncharacterized protein.
    
 0.656
A0A484CWJ9
Uncharacterized protein.
      
 0.627
A0A484DC27
Uncharacterized protein.
    
 0.627
A0A484CYS4
Methyltranfer_dom domain-containing protein.
      
 0.621
A0A484C0G0
Uncharacterized protein.
    
 0.587
A0A484DBY2
Cysteine dioxygenase.
    
 
 0.582
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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