A0A484C075 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C075

Uncharacterized protein. (213 aa)

Predicted Functional Partners:

A0A484CQT5

0.999

A0A484CC78

0.983

A0A484D801

0.955

A0A484DEY1

0.949

A0A484D5N7

0.939

A0A484CH77

0.930

A0A484D7A0

0.928

A0A484CWQ4

0.919

A0A484CAS4

0.916

A0A484CG32

0.916

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C075	A0A484CAS4	Uncharacterized protein.	EHN domain-containing protein.	0.916
A0A484C075	A0A484CC78	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A484C075	A0A484CG32	Uncharacterized protein.	Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.	0.916
A0A484C075	A0A484CH77	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.930
A0A484C075	A0A484CQT5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A484C075	A0A484CWQ4	Uncharacterized protein.	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.919
A0A484C075	A0A484D5N7	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.939
A0A484C075	A0A484D7A0	Uncharacterized protein.	Glutathione synthetase.	0.928
A0A484C075	A0A484D801	Uncharacterized protein.	Glutathione S-transferase kappa.	0.955
A0A484C075	A0A484DEY1	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.949
A0A484CAS4	A0A484C075	EHN domain-containing protein.	Uncharacterized protein.	0.916
A0A484CAS4	A0A484CC78	EHN domain-containing protein.	Uncharacterized protein.	0.931
A0A484CAS4	A0A484CG32	EHN domain-containing protein.	Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.	0.902
A0A484CAS4	A0A484CH77	EHN domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.913
A0A484CAS4	A0A484CQT5	EHN domain-containing protein.	Uncharacterized protein.	0.937
A0A484CAS4	A0A484D5N7	EHN domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.932
A0A484CAS4	A0A484D801	EHN domain-containing protein.	Glutathione S-transferase kappa.	0.916
A0A484CAS4	A0A484DEY1	EHN domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.908
A0A484CC78	A0A484C075	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A484CC78	A0A484CAS4	Uncharacterized protein.	EHN domain-containing protein.	0.931