STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C0B4Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
A0A484C720
RAP domain-containing protein.
  
 
 0.554
A0A484DS71
AMP_N domain-containing protein.
  
 
 0.548
A0A484DMV4
TPT domain-containing protein.
   
  
 0.536
A0A484DN07
C5-epim_C domain-containing protein.
      
 0.523
A0A484CFX3
AMP_N domain-containing protein.
    
 0.522
A0A484CXF1
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.522
A0A484D6W6
TPT domain-containing protein.
      
 0.522
A0A484DL68
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.522
A0A484C9K5
Uncharacterized protein.
  
 
 0.521
A0A484D7F4
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.521
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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