STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C0G2HMG box domain-containing protein. (789 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
   
 0.719
A0A484D3S6
HMG box domain-containing protein.
  
 
 
0.716
A0A484DNV1
HMG box domain-containing protein.
  
 
 
0.715
A0A484DG97
HMG box domain-containing protein.
    
 
0.707
A0A484DHQ5
Uncharacterized protein.
    
 
 0.666
A0A484CMQ8
HMG box domain-containing protein.
     
0.652
A0A484D9L8
Uncharacterized protein.
    
   0.648
A0A484DBR2
Uncharacterized protein.
    
   0.648
A0A484CKQ1
HMG box domain-containing protein.
    
0.633
A0A484CMK7
Uncharacterized protein.
    
 
 0.596
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.