STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C0L0Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
A0A484D544
Uncharacterized protein.
    
 
0.933
A0A484C2T1
Mitogen-activated protein kinase.
    
  0.795
A0A484CB11
Mitogen-activated protein kinase.
    
  0.795
A0A484CFH5
Mitogen-activated protein kinase.
    
  0.795
A0A484CXE3
Mitogen-activated protein kinase.
    
  0.795
A0A484BYU6
Runt-related transcription factor.
    
 0.695
A0A484C3V6
Runt-related transcription factor.
    
 0.695
A0A484C8B3
Runt-related transcription factor.
    
 0.695
A0A484CK66
ETS domain-containing protein.
    
0.623
A0A484D8I5
ETS domain-containing protein.
    
0.623
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.