Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C0Q2LEM domain-containing protein. (573 aa)    
Predicted Functional Partners:
A0A484CMI0
Mothers against decapentaplegic homolog.
    
 0.976
A0A484DM99
Mothers against decapentaplegic homolog.
    
 0.976
A0A484D2N1
Mothers against decapentaplegic homolog.
    
 0.972
A0A484DB49
Mothers against decapentaplegic homolog.
    
 0.972
A0A484DP09
Mothers against decapentaplegic homolog.
    
 0.972
A0A484C5S8
MSC domain-containing protein.
 
      0.899
A0A484CCV3
Uncharacterized protein.
    
 0.899
A0A484CRJ5
Uncharacterized protein.
    
 0.899
A0A484CP52
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.847
A0A484D0B5
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.847
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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