Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C129Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
A0A484DDA4
Uncharacterized protein.
   
    0.672
A0A484C5M5
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.669
A0A484CQP3
SAM domain-containing protein.
   
  
 0.656
A0A484CT31
Uncharacterized protein.
      
 0.628
A0A484CTU3
c-SKI_SMAD_bind domain-containing protein.
      
 0.624
A0A484CU14
Uncharacterized protein.
      
 0.624
A0A484CT45
Uncharacterized protein.
      
 0.614
A0A484DMJ6
Uncharacterized protein.
      
 0.611
A0A484CUN9
Uncharacterized protein.
      
 0.506
A0A484CR51
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
      
 0.445
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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