STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C138SSD domain-containing protein. (925 aa)    
Predicted Functional Partners:
A0A484CIG9
WD_REPEATS_REGION domain-containing protein.
      
 0.556
A0A484DCB4
Uncharacterized protein.
      
 0.516
A0A484CR28
OTU domain-containing protein.
      
 0.480
A0A484CRS2
Uncharacterized protein.
    
 
 0.475
A0A484C2J6
Uncharacterized protein.
   
  
 0.456
A0A484DP30
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.450
A0A484DGK5
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.435
A0A484C209
BTB domain-containing protein.
      
 0.427
A0A484CWY2
Uncharacterized protein; Belongs to the MAGUK family.
    
 
 0.427
A0A484CEA0
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
      
 0.418
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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