Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C161UBIQUITIN_CONJUGAT_2 domain-containing protein. (157 aa)    
Predicted Functional Partners:
A0A484C2T0
Uncharacterized protein.
    
 0.984
A0A484C2X2
Uncharacterized protein.
    
 0.979
A0A484DHQ5
Uncharacterized protein.
    
 0.944
A0A484D5N0
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.932
A0A484DEK6
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.932
A0A484DLK4
UBA_e1_C domain-containing protein.
   
 0.932
A0A484C4B2
RING-type domain-containing protein.
    
 0.931
A0A484CVU7
Uncharacterized protein.
    
 0.926
A0A484CGA3
RING-type domain-containing protein.
    
 0.924
A0A484CTX1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.889
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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