STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C169Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (889 aa)    
Predicted Functional Partners:
A0A484DJX7
Ig-like domain-containing protein.
    
 0.963
A0A484CJ90
Ig-like domain-containing protein.
    
 0.958
A0A484CJ93
Ig-like domain-containing protein.
    
 0.958
A0A484D7W6
Ig-like domain-containing protein.
    
 0.958
A0A484CRI7
Ion_trans domain-containing protein.
 
  
 
0.950
A0A484CML1
Ig-like domain-containing protein.
    
 0.932
A0A484CU82
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
  
  
 
0.901
A0A484D7R2
Ig-like domain-containing protein.
     
  0.900
A0A484C4E3
Uncharacterized protein.
   
 0.889
A0A484C1M0
Ion_trans domain-containing protein.
 
  
  0.841
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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