Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C186Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
A0A484D6R6
Uncharacterized protein.
    
 
 0.879
A0A484DF90
PCI domain-containing protein.
   
   0.833
A0A484C350
Uncharacterized protein.
    
 
 0.818
A0A484C7M9
Uncharacterized protein.
    
 
 0.818
A0A484C2V0
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
   0.816
A0A484D8F9
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
   0.811
A0A484D2Z4
MPN domain-containing protein.
   
 
 0.795
A0A484CQW0
PCI domain-containing protein.
   
   0.787
A0A484C8U8
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
   0.782
A0A484C5J4
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
   0.778
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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