A0A484C194 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C194

Uncharacterized protein. (562 aa)

Predicted Functional Partners:

A0A484BZ43

0.806

A0A484D9Z3

0.658

A0A484C4B1

0.618

A0A484CBY2

0.618

A0A484CGC7

0.618

A0A484CGE9

0.618

A0A484CIU0

0.618

A0A484CLN9

0.618

A0A484CTB6

0.618

A0A484CWQ0

0.618

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BZ43	A0A484C194	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.806
A0A484BZ43	A0A484C4B1	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.839
A0A484BZ43	A0A484CBY2	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.967
A0A484BZ43	A0A484CGC7	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.952
A0A484BZ43	A0A484CGE9	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.968
A0A484BZ43	A0A484CIU0	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.910
A0A484BZ43	A0A484CTB6	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.967
A0A484BZ43	A0A484CWQ0	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.839
A0A484C194	A0A484BZ43	Uncharacterized protein.	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	0.806
A0A484C194	A0A484C4B1	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A484C194	A0A484CBY2	Uncharacterized protein.	Fibroblast growth factor receptor.	0.618
A0A484C194	A0A484CGC7	Uncharacterized protein.	Fibroblast growth factor receptor.	0.618
A0A484C194	A0A484CGE9	Uncharacterized protein.	Fibroblast growth factor receptor.	0.618
A0A484C194	A0A484CIU0	Uncharacterized protein.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.618
A0A484C194	A0A484CLN9	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A484C194	A0A484CTB6	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A484C194	A0A484CWQ0	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A484C194	A0A484D9Z3	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A484C4B1	A0A484BZ43	Uncharacterized protein.	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	0.839
A0A484C4B1	A0A484C194	Uncharacterized protein.	Uncharacterized protein.	0.618