STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C1G6HECT domain-containing protein. (1125 aa)    
Predicted Functional Partners:
A0A484CME9
Uncharacterized protein.
   
 0.881
A0A484DN83
MPN domain-containing protein.
   
 
 0.867
A0A484DC74
HECT domain-containing protein.
   
 
0.865
A0A484DHQ5
Uncharacterized protein.
   
 
0.862
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.757
A0A484DJL6
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.751
A0A484CH41
Uncharacterized protein.
   
 0.733
A0A484CLU4
Uncharacterized protein.
   
 0.728
A0A484CRX5
Uncharacterized protein.
   
 0.728
A0A484DF37
Ubiquitin-like domain-containing protein.
   
 0.728
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.