STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C1J2J domain-containing protein. (2301 aa)    
Predicted Functional Partners:
A0A484DP30
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.700
A0A484DCP3
Uncharacterized protein.
   
  
 0.622
A0A484D0E8
Uncharacterized protein.
   
  
 0.617
A0A484C5K9
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
      
 0.570
A0A484D3L8
PX domain-containing protein.
    
 
 0.553
A0A484DF81
PX domain-containing protein.
    
 
 0.553
A0A484DNJ3
PX domain-containing protein.
    
 
 0.553
A0A484CSM7
SAC domain-containing protein.
   
  
 0.537
A0A484DCZ2
LsmAD domain-containing protein.
   
  
 0.536
A0A484DPW7
Uncharacterized protein.
   
  
 0.535
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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