STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C201SP-RING-type domain-containing protein. (1065 aa)    
Predicted Functional Partners:
A0A484C1L0
BTB domain-containing protein.
    
 0.845
A0A484C2E9
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.845
A0A484CF30
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.845
A0A484C3I2
Small ubiquitin-related modifier.
    
 0.836
A0A484C600
Small ubiquitin-related modifier.
    
 0.813
A0A484CHI0
Small ubiquitin-related modifier.
    
 0.813
A0A484CVQ6
Small ubiquitin-related modifier.
    
 0.813
A0A484DKU9
Small ubiquitin-related modifier.
    
 0.813
A0A484CVU7
Uncharacterized protein.
    
 0.757
A0A484CGF5
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.754
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.