STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C201SP-RING-type domain-containing protein. (1065 aa)    
Predicted Functional Partners:
A0A484C3I2
Small ubiquitin-related modifier.
    
 0.799
A0A484CKX0
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
    
 0.780
A0A484C1L0
BTB domain-containing protein.
    
 0.777
A0A484C2E9
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.777
A0A484CF30
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.777
A0A484C600
Small ubiquitin-related modifier.
    
 0.703
A0A484CHI0
Small ubiquitin-related modifier.
    
 0.703
A0A484CVQ6
Small ubiquitin-related modifier.
    
 0.703
A0A484DKU9
Small ubiquitin-related modifier.
    
 0.703
A0A484CVU7
Uncharacterized protein.
    
 0.692
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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