Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C221CCHC-type domain-containing protein. (230 aa)    
Predicted Functional Partners:
A0A484CQV5
Uncharacterized protein.
      
 0.625
A0A484D1N3
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
      
 0.615
A0A484DMF1
Uncharacterized protein.
    
 
 0.523
A0A484CL48
Uncharacterized protein.
      
 0.444
A0A484CLE8
Uncharacterized protein.
      
 0.444
A0A484CUT0
Uncharacterized protein.
      
 0.435
A0A484C5W9
Uncharacterized protein.
      
 0.434
A0A484DJL2
Uncharacterized protein.
      
 0.434
A0A484CRL2
Uncharacterized protein.
      
 0.419
A0A484C357
PH domain-containing protein.
      
 0.415
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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