Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C237Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
A0A484CND1
VPS9 domain-containing protein.
   
 0.994
A0A484DBX0
Uncharacterized protein.
   
 0.994
A0A484DIA8
Uncharacterized protein.
   
 0.994
A0A484C704
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.985
A0A484C9U5
Pep3_Vps18 domain-containing protein.
    
 0.979
A0A484BY20
Uncharacterized protein.
    
 0.974
A0A484D3K8
Uncharacterized protein.
    
 0.972
A0A484CRF8
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 0.971
A0A484DPI7
CNH domain-containing protein.
    
 0.965
A0A484DFH1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.960
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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