Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C243LRRCT domain-containing protein. (112 aa)    
Predicted Functional Partners:
A0A484C0Y0
Integrin beta; Belongs to the integrin beta chain family.
   
 0.920
A0A484DBV4
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.920
A0A484CPS4
Integrin beta; Belongs to the integrin beta chain family.
   
  0.919
A0A484C6X6
LRRNT domain-containing protein.
 
      0.889
A0A484D999
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.765
A0A484CQP8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.731
A0A484DN86
Integrin beta; Belongs to the integrin beta chain family.
   
 0.731
A0A484C9E5
Integrin beta.
   
 0.724
A0A484C264
Integrin beta; Belongs to the integrin beta chain family.
   
 0.723
A0A484CPU0
Integrin beta; Belongs to the integrin beta chain family.
   
 0.723
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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